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Genome Engineering Constructs from Qi Lab:
https://www.addgene.org/Yiping_Qi/

CRISPR design:
https://en.wikipedia.org/wiki/CRISPR/Cas_Tools
http://crispr.hzau.edu.cn/CRISPR2/
http://bioinfolab.miamioh.edu/CRISPR-DT/index.php
http://crispor.tefor.net/
http://www.e-crisp.org/E-CRISP/
http://www.rgenome.net/cas-offinder/
http://chopchop.cbu.uib.no/
https://bioconductor.org/packages/release/bioc/html/amplican.html

​Decoding Sanger sequencing data:
http://crispid.gbiomed.kuleuven.be/
http://dsdecode.scgene.com/


NGS analysis of CRISPR editing:
http://crispresso.pinellolab.partners.org/

Integrated genome browser:
http://bioviz.org/igb/index.html
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